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Neogen snp marker features
Candidate deletions identified by Axiom marker analysis. <t>A</t> <t>JI2822</t> pseudomolecules are indicated as lines and the positions of several known genes are indicated for reference. The positions of deletions in four FN lines are indicated as coloured dots offset to the right of each pseudomolecule and the approximate size of the deletion in Mb is indicated (see Supplementary Table 3 for more detail). Known positions for genes Apu and VicC are shown. B The fraction of alleles scored as a <t>SNP,</t> rather than “---”, for deletions at Apu and VicC is shown. The frequency is plotted for successive groups of 11 markers, beginning and ending 100 markers from the deletion end points. A scale of 1Mb is indicated. The dip below 9 out of 11 indicates the position of the deletion
Snp Marker Features, supplied by Neogen, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Candidate deletions identified by Axiom marker analysis. A JI2822 pseudomolecules are indicated as lines and the positions of several known genes are indicated for reference. The positions of deletions in four FN lines are indicated as coloured dots offset to the right of each pseudomolecule and the approximate size of the deletion in Mb is indicated (see Supplementary Table 3 for more detail). Known positions for genes Apu and VicC are shown. B The fraction of alleles scored as a SNP, rather than “---”, for deletions at Apu and VicC is shown. The frequency is plotted for successive groups of 11 markers, beginning and ending 100 markers from the deletion end points. A scale of 1Mb is indicated. The dip below 9 out of 11 indicates the position of the deletion

Journal: BMC Plant Biology

Article Title: Mapped deletions in a publicly available Fast Neutron mutant collection for gene identification in pea

doi: 10.1186/s12870-026-08508-8

Figure Lengend Snippet: Candidate deletions identified by Axiom marker analysis. A JI2822 pseudomolecules are indicated as lines and the positions of several known genes are indicated for reference. The positions of deletions in four FN lines are indicated as coloured dots offset to the right of each pseudomolecule and the approximate size of the deletion in Mb is indicated (see Supplementary Table 3 for more detail). Known positions for genes Apu and VicC are shown. B The fraction of alleles scored as a SNP, rather than “---”, for deletions at Apu and VicC is shown. The frequency is plotted for successive groups of 11 markers, beginning and ending 100 markers from the deletion end points. A scale of 1Mb is indicated. The dip below 9 out of 11 indicates the position of the deletion

Article Snippet: A previously developed Axiom array of 84,690 SNP marker features [ ] was used to genotype the wild-type progenitor line, JI2822, and seven FN mutant lines (performed by Neogen Europe, Ayr, Scotland).

Techniques: Marker